7RGBA

O2-, plp-dependent desaturase plu4 product-bound enzyme
Total Genus 136
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
136
sequence length
374
structure length
371
Chain Sequence
YDSLTEVEVEGLSYLYNFADGHAYHDINEHYVDIINNLQRYWQEGKDHSIPDMEKAFKNQFAELIDSSTLHSTNHFSVCPTASNSIDIVAAWLHKENKRTALIEPAFDNLYLLLKRRGVDISAFDELALKNEHQLAQIVSSGDIDALFLVNPNNPTGLEMTESEFVYLVEQCKAHNITILLDRTFRIYGKTNFDDYQILEQSGIDYVVIEDTGTWPTQDLKISLMVYSEAISSTMRLLYEEIFLCSSNFALALLKQFVAVTAKFGVDATIKNEVRRRSETINDALAGTGLKVFDNKCQLPLCWIDISATGYDDVSFAARLKEHDIAVLPGRFFYWNSKSQHTQFIRVSLMKPDAEFYEGIGKLKEAVTRIL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Biosynthetic protein
molecule keywords Aminotran_1_2 domain-containing protein
publication title A shared mechanistic pathway for pyridoxal phosphate-dependent arginine oxidases.
pubmed doi rcsb
source organism Pseudoalteromonas luteoviolacea
total genus 136
structure length 371
sequence length 374
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2021-07-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00155 Aminotran_1_2 Aminotransferase class I and II
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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