7RMHA

Substance p bound to active human neurokinin 1 receptor in complex with minigs399
Total Genus 47
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
47
sequence length
240
structure length
216
Chain Sequence
NEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGADNSGKSTIVKQMRGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLASKIEDYFPEFARYTTPPGEDPRVTRAKYFIRDEFLRISTASRHYCYPHFTCAVDTENARRIFNDCRDIIQRMHLRQYELL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Signaling protein/membrane protein
molecule keywords Guanine nucleotide-binding protein G(s) subunit alpha isoforms short
publication title Selective G protein signaling driven by Substance P-Neurokinin Receptor structural dynamics
rcsb
source organism Homo sapiens
total genus 47
structure length 216
sequence length 240
ec nomenclature
pdb deposition date 2021-07-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00503 G-alpha G-protein alpha subunit
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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