7WGAA

2.2 angstroms resolution structure analysis of two refined n-acetylneuraminyllactose-wheat germ agglutinin isolectin complexes
Total Genus 42
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
171
structure length
171
Chain Sequence
ERCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKGCQNGACWTSKRCGSQAGGATCTNNQCCSQYGYCGFGAEYCGAGCQGGPCRADIKCGSQAGGKLCPNNLCCSQWGFCGLGSEFCGGGCQSGACSTDKPCGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQSGGCDG
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title 2.2 A resolution structure analysis of two refined N-acetylneuraminyl-lactose--wheat germ agglutinin isolectin complexes.
pubmed doi rcsb
molecule keywords WHEAT GERM LECTIN
molecule tags Lectin (agglutinin)
source organism Triticum aestivum
total genus 42
structure length 171
sequence length 171
chains with identical sequence B
ec nomenclature
pdb deposition date 1990-04-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00187 Chitin_bind_1 Chitin recognition protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 7wgaA04
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 7wgaA02
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 7wgaA03
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 7wgaA01
1UHAA 1K7UA 1K7VA 1WGCA 2DKVA 2CWGA 1P9GA 1Q9BA 1WGTA 1ULMA 9WGAA 2LB7A 1ULKA 1ULNA 4AMLA 1K7TA 1WKXA 4MPIA 1P9ZA 4WP4A 1HEVA 2X52A 2UVOA 7WGAA 2WGCA 2X3TA
chains in the Genus database with same CATH superfamily
1UHAA 4E1RA 2K9HA 1DS3I 1UUCA 2KMQA 1XBTA 3D00A 3OXLA 5E3PA 1OMUA 1Z2IA 1OMTA 5FUXA 5FUYA 1Q9BA 1WGTA 1AN1I 1ULMA 2KMRA 2GKVA 3CXLA 1CT4I 4HGUA 1Y1BA 1CGJI 2W0TA 1OVOA 1OYVI 1SGRI 1SGPI 1TBRR 1Z7KB 1SGYI 2Y0MA 1PJUA 1TIHA 3TOBA 2BUSA 2QQEA 4AMLA 1CT0I 1KBEA 2ORWA 4MPIA 5EX0A 3VE5A 1P9ZA 4WP4A 4B6DA 1MT1A 2SGDI 2YUUA 2V1CA 5CCMA 2L8EA 2KMOA 1HEVA 1RFHA 2DB6A 1IW4A 1V1HA 2UVOA 1M8BA 1Y1CA 1UVGA 1H0ZA 3R5CA 2RC4A 4UXIA 2V53A 4E1PA 2E73A 2QPOA 1TBOA 2DKVA 3FSXA 5E3QA 1FY7A 2ENZA 2NU1I 1HPTA 1R79A 4UXHA 3TO9A 1P9GA 3TO7A 2XRCA 1M8CA 3OXFA 1CT2I 1NXUA 3TO6A 1CE3A 2V1CC 1PTRA 4OVOA 2SGFI 1TUSA 1N13A 5FUVA 3QWPA 5FUWA 1HJAI 2LB7A 3UFFA 1CGII 2J9RA 3SGBI 3UGDA 5HI7A 5HQ8A 1BUSA 1ULKA 5J8CA 3R5BA 1WKXA 3VDUA 2B8TA 2DIPA 2ROWA 2CWHA 2NU4I 1MJ9A 1PCEA 2M5XA 2QQDA 2X52A 2OU2A 7WGAA 3R5DA 2CJSC 2ARPF 1BMOA 3PDNA 3QTLD 1K7VA 1WGCA 2WCYA 1KMAA 2UZ3A 2KMPA 2N52A 3TJQA 1HDLA 3OVOA 2WVJA 2JZMA 3UGLA 3GOXA 1TBQR 2OZUA 3OL0A 1V1IA 1YU6C 2RIJA 4FKDA 1FARA 3VDPA 2NU3I 3FSYA 2ODDA 3R5AA 1VDDA 1TURA 4JCVE 3UGIA 1PTQA 1TGSI 3TOAA 1LR7A 2JYYA 2SGPI 3BJIA 1DS2I 3SEKC 1TBNA 1MJBA 9WGAA 4UXJA 2GKRI 2GKTI 1TOTA 1W3SA 2JA1A 2YQPA 5JHWC 3RU0A 1FYBA 2LEOA 2WGCA 3HH2C 2X3TA 2B0UC 3SGQI 3FC3A 2JW6A 3B4VC 1K7UA 1W4RA 2ORVA 2QQCA 2SGQI 1X4SA 2J87A 2NU2I 1KBFA 2FNFX 2CWGA 2OVOA 2N71A 2QQ0A 2GIVA 2KCXA 2PQ8A 1U5KA 3MEKA 1LR8A 2JXDA 2ELIA 1LR9A 1Y8FA 1IY5A 3E59A 1S20A 2GVIA 2NU0I 1CSOI 4L9MA 2ERWA 1X74A 5CCLA 1ULNA 1K7TA 2VRWB 5J8FA 1SGQI 1R0RI 1XA6A 3E2IA 3KY9A 2P6AC 1CHOI 1YTPA 2N1AB 4SGBI 5EX3A 3QAHA 1NUBA 2SGEI 3UEJA 4A24A 1SGEI 2LUYA 4DNCA 2E5RA 2F3CI 1MJAA 4GI3C 1FAQA 2N17A 1SGDI 1PPFI 2L7XA 3OXGA 2OD1A 3UEYA 1WTJA 1SGNI 2CWFA 3UOEA 5E3RA 2A20A 5DAEA 1IY6A 2ENNA 1XX6A 1UVFA
chains in the Genus database with same CATH topology
1UHAA 1K7UA 1K7VA 1WGCA 2DKVA 2CWGA 1P9GA 1Q9BA 1WGTA 1ULMA 9WGAA 2LB7A 1ULKA 1ULNA 4AMLA 1K7TA 1WKXA 4MPIA 1P9ZA 4WP4A 1HEVA 2X52A 2UVOA 7WGAA 2WGCA 2X3TA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1UHA A;  1K7U A;  1K7V A;  1WGC A;  2DKV A;  2CWG A;  1P9G A;  1Q9B A;  1WGT A;  1ULM A;  9WGA A;  2LB7 A;  1ULK A;  1ULN A;  4AML A;  1K7T A;  1WKX A;  4MPI A;  1P9Z A;  4WP4 A;  1HEV A;  2X52 A;  2UVO A;  7WGA A;  2WGC A;  2X3T A; 
#chains in the Genus database with same CATH topology
 1UHA A;  4E1R A;  2K9H A;  1DS3 I;  1UUC A;  2KMQ A;  1XBT A;  3D00 A;  3OXL A;  5E3P A;  1OMU A;  1Z2I A;  1OMT A;  5FUX A;  5FUY A;  1Q9B A;  1WGT A;  1AN1 I;  1ULM A;  2KMR A;  2GKV A;  3CXL A;  1CT4 I;  4HGU A;  1Y1B A;  1CGJ I;  2W0T A;  1OVO A;  1OYV I;  1SGR I;  1SGP I;  1TBR R;  1Z7K B;  1SGY I;  2Y0M A;  1PJU A;  1TIH A;  3TOB A;  2BUS A;  2QQE A;  4AML A;  1CT0 I;  1KBE A;  2ORW A;  4MPI A;  5EX0 A;  3VE5 A;  1P9Z A;  4WP4 A;  4B6D A;  1MT1 A;  2SGD I;  2YUU A;  2V1C A;  5CCM A;  2L8E A;  2KMO A;  1HEV A;  1RFH A;  2DB6 A;  1IW4 A;  1V1H A;  2UVO A;  1M8B A;  1Y1C A;  1UVG A;  1H0Z A;  3R5C A;  2RC4 A;  4UXI A;  2V53 A;  4E1P A;  2E73 A;  2QPO A;  1TBO A;  2DKV A;  3FSX A;  5E3Q A;  1FY7 A;  2ENZ A;  2NU1 I;  1HPT A;  1R79 A;  4UXH A;  3TO9 A;  1P9G A;  3TO7 A;  2XRC A;  1M8C A;  3OXF A;  1CT2 I;  1NXU A;  3TO6 A;  1CE3 A;  2V1C C;  1PTR A;  4OVO A;  2SGF I;  1TUS A;  1N13 A;  5FUV A;  3QWP A;  5FUW A;  1HJA I;  2LB7 A;  3UFF A;  1CGI I;  2J9R A;  3SGB I;  3UGD A;  5HI7 A;  5HQ8 A;  1BUS A;  1ULK A;  5J8C A;  3R5B A;  1WKX A;  3VDU A;  2B8T A;  2DIP A;  2ROW A;  2CWH A;  2NU4 I;  1MJ9 A;  1PCE A;  2M5X A;  2QQD A;  2X52 A;  2OU2 A;  7WGA A;  3R5D A;  2CJS C;  2ARP F;  1BMO A;  3PDN A;  3QTL D;  1K7V A;  1WGC A;  2WCY A;  1KMA A;  2UZ3 A;  2KMP A;  2N52 A;  3TJQ A;  1HDL A;  3OVO A;  2WVJ A;  2JZM A;  3UGL A;  3GOX A;  1TBQ R;  2OZU A;  3OL0 A;  1V1I A;  1YU6 C;  2RIJ A;  4FKD A;  1FAR A;  3VDP A;  2NU3 I;  3FSY A;  2ODD A;  3R5A A;  1VDD A;  1TUR A;  4JCV E;  3UGI A;  1PTQ A;  1TGS I;  3TOA A;  1LR7 A;  2JYY A;  2SGP I;  3BJI A;  1DS2 I;  3SEK C;  1TBN A;  1MJB A;  9WGA A;  4UXJ A;  2GKR I;  2GKT I;  1TOT A;  1W3S A;  2JA1 A;  2YQP A;  5JHW C;  3RU0 A;  1FYB A;  2LEO A;  2WGC A;  3HH2 C;  2X3T A;  2B0U C;  3SGQ I;  3FC3 A;  2JW6 A;  3B4V C;  1K7U A;  1W4R A;  2ORV A;  2QQC A;  2SGQ I;  1X4S A;  2J87 A;  2NU2 I;  1KBF A;  2FNF X;  2CWG A;  2OVO A;  2N71 A;  2QQ0 A;  2GIV A;  2KCX A;  2PQ8 A;  1U5K A;  3MEK A;  1LR8 A;  2JXD A;  2ELI A;  1LR9 A;  1Y8F A;  1IY5 A;  3E59 A;  1S20 A;  2GVI A;  2NU0 I;  1CSO I;  4L9M A;  2ERW A;  1X74 A;  5CCL A;  1ULN A;  1K7T A;  2VRW B;  5J8F A;  1SGQ I;  1R0R I;  1XA6 A;  3E2I A;  3KY9 A;  2P6A C;  1CHO I;  1YTP A;  2N1A B;  4SGB I;  5EX3 A;  3QAH A;  1NUB A;  2SGE I;  3UEJ A;  4A24 A;  1SGE I;  2LUY A;  4DNC A;  2E5R A;  2F3C I;  1MJA A;  4GI3 C;  1FAQ A;  2N17 A;  1SGD I;  1PPF I;  2L7X A;  3OXG A;  2OD1 A;  3UEY A;  1WTJ A;  1SGN I;  2CWF A;  3UOE A;  5E3R A;  2A20 A;  5DAE A;  1IY6 A;  2ENN A;  1XX6 A;  1UVF A; 
#chains in the Genus database with same CATH homology
 1UHA A;  1K7U A;  1K7V A;  1WGC A;  2DKV A;  2CWG A;  1P9G A;  1Q9B A;  1WGT A;  1ULM A;  9WGA A;  2LB7 A;  1ULK A;  1ULN A;  4AML A;  1K7T A;  1WKX A;  4MPI A;  1P9Z A;  4WP4 A;  1HEV A;  2X52 A;  2UVO A;  7WGA A;  2WGC A;  2X3T A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...