8DEDH

Cryo-em structure of western equine encephalitis virus vlp in complex with skw19 fab
Total Genus 26
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
26
sequence length
130
structure length
130
Chain Sequence
EVQLVESGGGLAKPGGSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVSVISSHYSTYYADSVKGRFTISRDNSKNTVSLQVNSLRAEDTAVYYCAKVGRSGYCTASGCNALLFDWFDVWGPGVLVTVSS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Cryo-EM Structure of Western Equine Encephalitis Virus VLP in complex with SKW19 fab
rcsb
molecule keywords Spike glycoprotein E1
molecule tags Virus/immune system
source organism Western equine encephalitis virus
total genus 26
structure length 130
sequence length 130
chains with identical sequence U
ec nomenclature
pdb deposition date 2022-06-20
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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