8FG6B

Design of amyloidogenic peptide traps
Total Genus 52
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
52
sequence length
151
structure length
151
Chain Sequence
GSVTFEFENLSEEAAEKVKKYVKEVAEKLGVEVKVEEEEGKLKIYVENLKEEDALDIFKYAALAAELDQEYLDMVEAAIKAYHLFKEYDENATIEITIDDEGIEVKVESGDRVVTLKFKNVSKEEVEEAVKEALKQLEAGQKKVEVEVEGG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Design of amyloidogenic peptide traps
rcsb
molecule keywords amyloidogenic peptide
molecule tags De novo protein
source organism Synthetic construct
total genus 52
structure length 151
sequence length 151
ec nomenclature
pdb deposition date 2022-12-12
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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