8HFPA

Crystal structure of the methyl-cpg-binding domain of setdb2 in complex with the cysteine-rich domain of c11orf46 protein
Total Genus 9
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
68
structure length
68
Chain Sequence
SKVYDSQGLLIFSGMDLCDCLDEDCLGCFYACPACGSTKCGAECRCDRKWLYEQIEIEGGEIIHNKHA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural Evidence for Protein Binding by the Methyl-CpG-Binding Domain of SETDB Proteins
rcsb
molecule tags Transcription
source organism Homo sapiens
molecule keywords ARL14 effector protein
total genus 9
structure length 68
sequence length 68
chains with identical sequence B
ec nomenclature
pdb deposition date 2022-11-11
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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