1HRRA

The three dimensional structure of the reduced high potential iron-sulfur protein from chromatium vinosum through nmr
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
85
structure length
85
Chain Sequence
SAPANAVAADDATAIALKYNQDATKSERVAAARPGLPPEEQHCANCQFMQADAAGATDEWKGCQLFPGKLINVNGWCASWTLKAG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Electron transfer (iron-sulfur)
molecule keywords REDUCED HIGH POTENTIAL IRON SULFUR PROTEIN
publication title The three-dimensional solution structure of the reduced high-potential iron-sulfur protein from Chromatium vinosum through NMR.
pubmed doi rcsb
total genus 27
structure length 85
sequence length 85
ec nomenclature
pdb deposition date 1995-01-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01355 HIPIP High potential iron-sulfur protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
4.10.490.10 Few Secondary Structures Irregular High-Potential Iron-Sulfur Protein; Chain A High potential iron-sulphur protein 1hrrA00
1IUAA 3A39A 2HIPA 1HRRA 1EYTA 5D8VA 1ISUA 1PIJA 2AMSA 1NOEA 3H31A 3HIPA 1HIPA 1NEHA 1HRQA 1B0YA 1JS2A 1HPIA 1PIHA 1CKUA 3A38A 2FLAA 1HLQA
chains in the Genus database with same CATH superfamily
1IUAA 3A39A 2HIPA 1HRRA 1EYTA 5D8VA 1ISUA 1PIJA 2AMSA 1NOEA 3H31A 3HIPA 1HIPA 1NEHA 1HRQA 1B0YA 1JS2A 1HPIA 1PIHA 1CKUA 3A38A 2FLAA 1HLQA
chains in the Genus database with same CATH topology
1IUAA 3A39A 2HIPA 1HRRA 1EYTA 5D8VA 1ISUA 1PIJA 2AMSA 1NOEA 3H31A 3HIPA 1HIPA 1NEHA 1HRQA 1B0YA 1JS2A 1HPIA 1PIHA 1CKUA 3A38A 2FLAA 1HLQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1IUA A;  3A39 A;  2HIP A;  1HRR A;  1EYT A;  5D8V A;  1ISU A;  1PIJ A;  2AMS A;  1NOE A;  3H31 A;  3HIP A;  1HIP A;  1NEH A;  1HRQ A;  1B0Y A;  1JS2 A;  1HPI A;  1PIH A;  1CKU A;  3A38 A;  2FLA A;  1HLQ A; 
#chains in the Genus database with same CATH topology
 1IUA A;  3A39 A;  2HIP A;  1HRR A;  1EYT A;  5D8V A;  1ISU A;  1PIJ A;  2AMS A;  1NOE A;  3H31 A;  3HIP A;  1HIP A;  1NEH A;  1HRQ A;  1B0Y A;  1JS2 A;  1HPI A;  1PIH A;  1CKU A;  3A38 A;  2FLA A;  1HLQ A; 
#chains in the Genus database with same CATH homology
 1IUA A;  3A39 A;  2HIP A;  1HRR A;  1EYT A;  5D8V A;  1ISU A;  1PIJ A;  2AMS A;  1NOE A;  3H31 A;  3HIP A;  1HIP A;  1NEH A;  1HRQ A;  1B0Y A;  1JS2 A;  1HPI A;  1PIH A;  1CKU A;  3A38 A;  2FLA A;  1HLQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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