The results page of any search run on Genus has a "raw" button which can be used to open a CSV formatted list of results
Example - display CSV formatted list of RNA chains with Genus values between 10 and 20
http://genus.fuw.edu.pl/browse/?raw=1&set=True&is_rna=True&by_genus=True&value=10;20
The query can be specified using the following GET parameters
Parameter | Values/Type | Description |
---|---|---|
raw | {1, 0} | if "1" returns results as a "raw" text file instead of a webpage |
set | {True, False} | if True returns full list of results, if False or empty only for Non-Redundant chains |
is_rna | {True, False} | if True returns results for RNA, if False or empty for Proteins |
by_genus | {True, False} | if True returns results with Total genus given in the value parameter, otherwise returns results with the Chain length specified by the value parameter |
value | x;y | mininum (including) and maximum (excluding) values - used in conjunction with the by_genus parameter |
molkey | String | return results for the given Molecule Keyword |
moltag | String | return results for the given Molecule Tags |
pfam | String | return results for the given PFAM descriptor |
ec | String | return results for the given EC code |
cath | String | return results for the given CATH topology |
catha | String | return results for the given CATH architecture |
cathc | String | return results for the given CATH class |
tag | String | return results for the given Tag keyword |
/nogenus.txt.gz | Return a gzipped list of all chains for which Genus could NOT be computed. Format: pdbid;chain;type type = {P,R} - Protein/RNA |
/_all_genus | Return a list of all Protein and RNA chains with total genus. Format: pdbid;chain;type;total_genus type = {P,R} - Protein/RNA |
/_all_genus.txt.gz | Return a gzipped list of all Protein and RNA chains with total genus. Format: pdbid;chain;type;total_genus type = {P,R} - Protein/RNA |
/_all.txt.gz | Return a gzipped list of all chains for which Genus was computed (includes entries with identical chains), Format: pdbid;chain; |