1TULA

Structure of tlp20
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
102
structure length
102
Chain Sequence
GTPDIIVNAQINSEDENVLDFIIEDEYYLKKRGVGAHIIKVASSPQLRLLYKNAYSTVSCGNYGVLCNLVQNGEYDLNAIMFNCAEIKLNKGQMLFQTKIWR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Molecular structure of a proteolytic fragment of TLP20.
pubmed doi rcsb
molecule keywords TLP20
molecule tags Telokin-like protein
total genus 23
structure length 102
sequence length 102
ec nomenclature
pdb deposition date 1996-08-17
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.40.20 Mainly Beta Distorted Sandwich Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A Baculovirus telokin-like protein 20 1tulA00
1TULA
chains in the Genus database with same CATH superfamily
1SLHA 1F7KA 1RN8A 4OOQA 1DUCA 2J4QA 2XY3A 3C2TA 3ZF1A 3ZF6A 2OKDA 1SJNA 2BAZA 2V9XA 1PKHA 3MDXA 3TPWA 2XX6A 4LHRA 4AO5A 4APZ1 3C3IA 1F7NA 4OOPA 3LOJA 3ZEZA 4DHKA 2WE1A 3SO2A 1F7OA 5F9KA 3MBQA 2PY4A 2BSYA 1DUNA 2XCEA 1VYQA 1F7QA 2HXDA 5CCOA 1SNFA 5ECTA 3TQZA 3ZF5A 2HQUA 4GK6A 3TP1A 1Q5UX 2OKBA 3T70A 1TULA 1RNJA 4WRKA 3KM3A 3TRLA 3T60A 2J4HA 1XS6A 2Y1TA 5CCTA 3TRNA 3TSLA 1SMCA 1PKKA 1Q5HA 1XS1A 3I93A 4GCYA 1F7RA 3LQWA 3ZF3A 2D4MA 2Y8CA 3CA9A 2HRMA 1EU5A 3H6XA 2OKEA 1F7PA 2ZDCA 3P48A 2YZJA 3T64A 2XCDA 4B0HA 3ARNA 3ZF2A 3TQ3A 1SIXA 2HXBA 2QXXA 2WE2A 3TQ4A 3TQ5A 1EUWA 4A6AA 3GF0A 3HZAA 1F7DA 2R9QA 3TPYA 2WE3A 1SEHA 2D4NA 3F4FA 2HR6A 5EDDA 3ZF4A 2OL0A 1DUPA 3TPNA 4XJCA 1PKJA 3H6DA 4AOOA 3ZF0A 1DUTA 3T6YA 3EHWA 2QLPA 2PC5A 1SM8A 3HHQA 4GV8A 1DUDA 2D4LA 3TTAA 4AOZA 2WE0A 3ECYA 3TPSA 2BT1A 3TS6A 1OGHA 1SYLA 1XS4A 1MQ7A 2OL1A 3ARAA
chains in the Genus database with same CATH topology
1TULA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TUL A; 
#chains in the Genus database with same CATH topology
 1SLH A;  1F7K A;  1RN8 A;  4OOQ A;  1DUC A;  2J4Q A;  2XY3 A;  3C2T A;  3ZF1 A;  3ZF6 A;  2OKD A;  1SJN A;  2BAZ A;  2V9X A;  1PKH A;  3MDX A;  3TPW A;  2XX6 A;  4LHR A;  4AO5 A;  4APZ 1;  3C3I A;  1F7N A;  4OOP A;  3LOJ A;  3ZEZ A;  4DHK A;  2WE1 A;  3SO2 A;  1F7O A;  5F9K A;  3MBQ A;  2PY4 A;  2BSY A;  1DUN A;  2XCE A;  1VYQ A;  1F7Q A;  2HXD A;  5CCO A;  1SNF A;  5ECT A;  3TQZ A;  3ZF5 A;  2HQU A;  4GK6 A;  3TP1 A;  1Q5U X;  2OKB A;  3T70 A;  1TUL A;  1RNJ A;  4WRK A;  3KM3 A;  3TRL A;  3T60 A;  2J4H A;  1XS6 A;  2Y1T A;  5CCT A;  3TRN A;  3TSL A;  1SMC A;  1PKK A;  1Q5H A;  1XS1 A;  3I93 A;  4GCY A;  1F7R A;  3LQW A;  3ZF3 A;  2D4M A;  2Y8C A;  3CA9 A;  2HRM A;  1EU5 A;  3H6X A;  2OKE A;  1F7P A;  2ZDC A;  3P48 A;  2YZJ A;  3T64 A;  2XCD A;  4B0H A;  3ARN A;  3ZF2 A;  3TQ3 A;  1SIX A;  2HXB A;  2QXX A;  2WE2 A;  3TQ4 A;  3TQ5 A;  1EUW A;  4A6A A;  3GF0 A;  3HZA A;  1F7D A;  2R9Q A;  3TPY A;  2WE3 A;  1SEH A;  2D4N A;  3F4F A;  2HR6 A;  5EDD A;  3ZF4 A;  2OL0 A;  1DUP A;  3TPN A;  4XJC A;  1PKJ A;  3H6D A;  4AOO A;  3ZF0 A;  1DUT A;  3T6Y A;  3EHW A;  2QLP A;  2PC5 A;  1SM8 A;  3HHQ A;  4GV8 A;  1DUD A;  2D4L A;  3TTA A;  4AOZ A;  2WE0 A;  3ECY A;  3TPS A;  2BT1 A;  3TS6 A;  1OGH A;  1SYL A;  1XS4 A;  1MQ7 A;  2OL1 A;  3ARA A; 
#chains in the Genus database with same CATH homology
 1TUL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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