The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
10
|
sequence length |
36
|
structure length |
36
|
Chain Sequence |
DDVAARLRAAGFGAVGAGATAEETRRMLHRAFDTLA
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| publication title |
The crystal structure of an unusual processivity factor, herpes simplex virus UL42, bound to the C terminus of its cognate polymerase.
pubmed doi rcsb |
| molecule tags |
Dna binding protein/transferase
|
| source organism |
Human herpesvirus 1
|
| molecule keywords |
DNA POLYMERASE PROCESSIVITY FACTOR
|
| total genus |
10
|
| structure length |
36
|
| sequence length |
36
|
| chains with identical sequence |
D, F, H
|
| ec nomenclature |
ec
2.7.7.7: DNA-directed DNA polymerase. |
| pdb deposition date | 1999-12-14 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| B | PF11590 | DNAPolymera_Pol | DNA polymerase catalytic subunit Pol |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the Genus database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
