1LIQA

Non-native solution structure of a fragment of the ch1 domain of cbp
Total Genus 3
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
3
sequence length
27
structure length
27
Chain Sequence
EVRACSLPHCRTMKNVLNHMTHCQAGK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title A New Zinc Binding Fold Underlines the Versatility of Zinc Binding Modules in Protein Evolution
pubmed doi rcsb
molecule tags Protein binding
molecule keywords CREB Binding Protein
total genus 3
structure length 27
sequence length 27
ec nomenclature ec 2.3.1.48: Histone acetyltransferase.
pdb deposition date 2002-04-18
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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