1XV9E

Crystal structure of car/rxr heterodimer bound with src1 peptide, fatty acid, and 5b-pregnane-3,20-dione.
Total Genus 2
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
2
sequence length
10
structure length
10
Chain Sequence
HKILHRLLQE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title A Structural Basis for Constitutive Activity in the Human CAR/RXRalpha Heterodimer.
pubmed doi rcsb
molecule tags Dna binding protein
source organism Homo sapiens
molecule keywords Retinoic acid receptor RXR-alpha
total genus 2
structure length 10
sequence length 10
chains with identical sequence F, G, H
ec nomenclature ec 2.3.1.48: Histone acetyltransferase.
pdb deposition date 2004-10-27
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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