3ZF4A

Phage dutpases control transfer of virulence genes by a proto- oncogenic g protein-like mechanism. (staphylococcus bacteriophage 80alpha dutpase y81a mutant with dupnhpp).
Total Genus 22

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
168
structure length
164
Chain Sequence
TNTLQVKLLSKNARMPERNHKTDAGYDIFSAETVVLEPQEKAVIKTDVAVSIPEGYVGLLTSRSGVSSKTHLVIETGKIDAGAHGNLGINIKNDHEDDKMQTIFLRNIDNEKIFEKERHLYKLGSYRIEKGERIAQLVIVPIWTPELKQVEEFEERGEKFGSSG

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTI1 (11-14)S2 (18-19)TI2 (21-24)S15 (133-142)S3 (27-31)S6 (57-63)S5 (41-52)TII5 (130-133)S4 (35-37)S9 (87-94)TII4 (123-126)TII1 (38-41)TII2 (54-57)S8 (78-80)AH1 (65-70)TII3 (81-84)S12 (112-113)S13 (122-123)S14 (127-129)S1 (6-9)S7 (73-75)S10 (102-103)S11 (107-108)TI3 (108-111)Updating...
connected with : NaN
molecule tags Hydrolase
source organism Staphylococcus phage 80alpha
publication title Phage Dutpases Control Transfer of Virulence Genes by a Proto-Oncogenic G Protein-Like Mechanism.
pubmed doi rcsb
molecule keywords DUTPASE
total genus 22
structure length 164
sequence length 168
ec nomenclature ec 3.6.1.23: dUTP diphosphatase.
pdb deposition date 2012-12-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00692 dUTPase dUTPase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.40.10 Mainly Beta Distorted Sandwich Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A 3zf4A00
1OGHA 3TPWA 1F7QA 4OOPA 3ARNA 2D4MA 1PKKA 2OL0A 3C3IA 1EU5A 2QXXA 3TQ4A 4B0HA 5ECTA 1F7OA 3TQ5A 1XS6A 5EDDA 2OKEA 3ZF3A 2HRMA 3T64A 3TPYA 2QLPA 1SMCA 3ZF4A 3MBQA 3H6DA 5F9KA 2XY3A 3GF0A 1XS1A 2ZDCA 5CCTA 2HQUA 4A6AA 3LOJA 1SJNA 2HXDA 1SM8A 2BAZA 2V9XA 1Q5UX 1DUDA 1F7DA 2Y1TA 3I93A 2D4LA 3ZF0A 3ZF6A 3ZF1A 3ZF5A 1RNJA 3T70A 1SLHA 3P48A 2BT1A 2PC5A 4AOOA 1DUNA 3T6YA 4DHKA 3TQ3A 2WE3A 3HHQA 3TPSA 4GV8A 2WE1A 1XS4A 2BSYA 1PKJA 2J4QA 1SIXA 1VYQA 2WE0A 2D4NA 2OKDA 1EUWA 2PY4A 3ZF2A 2YZJA 2XCEA 1PKHA 3LQWA 2WE2A 3TS6A 1DUCA 4GK6A 3EHWA 4WRKA 1MQ7A 3TRNA 3TTAA 4AOZA 4GCYA 4APZ1 3TSLA 2XCDA 1Q5HA 1RN8A 1SNFA 4LHRA 3KM3A 3TPNA 2OKBA 4OOQA 3H6XA 2XX6A 2HXBA 3C2TA 1F7NA 1DUTA 1F7KA 3F4FA 2OL1A 3TP1A 1SYLA 4XJCA 1DUPA 3TQZA 4AO5A 3ZEZA 1F7PA 1F7RA 2J4HA 2Y8CA 3T60A 3TRLA 3ECYA 2HR6A 2R9QA 3SO2A 3MDXA 3HZAA 3CA9A 5CCOA 1SEHA 3ARAA
chains in the Genus database with same CATH superfamily
1OGHA 3TPWA 1F7QA 4OOPA 3ARNA 2D4MA 1PKKA 2OL0A 3C3IA 1EU5A 2QXXA 3TQ4A 4B0HA 5ECTA 1F7OA 3TQ5A 1XS6A 5EDDA 2OKEA 3ZF3A 2HRMA 3T64A 3TPYA 2QLPA 1SMCA 3ZF4A 3MBQA 3H6DA 5F9KA 2XY3A 3GF0A 1XS1A 2ZDCA 5CCTA 2HQUA 4A6AA 3LOJA 1SJNA 2HXDA 1SM8A 2BAZA 2V9XA 1Q5UX 1DUDA 1F7DA 2Y1TA 3I93A 2D4LA 3ZF0A 3ZF6A 3ZF1A 3ZF5A 1RNJA 3T70A 1SLHA 3P48A 2BT1A 2PC5A 4AOOA 1DUNA 3T6YA 4DHKA 3TQ3A 2WE3A 3HHQA 3TPSA 4GV8A 2WE1A 1XS4A 2BSYA 1PKJA 2J4QA 1SIXA 1VYQA 2WE0A 2D4NA 2OKDA 1EUWA 2PY4A 3ZF2A 2YZJA 2XCEA 1PKHA 3LQWA 2WE2A 3TS6A 1DUCA 4GK6A 3EHWA 4WRKA 1MQ7A 3TRNA 3TTAA 4AOZA 4GCYA 4APZ1 3TSLA 2XCDA 1Q5HA 1RN8A 1SNFA 4LHRA 3KM3A 3TPNA 2OKBA 4OOQA 3H6XA 2XX6A 2HXBA 3C2TA 1F7NA 1DUTA 1F7KA 3F4FA 2OL1A 3TP1A 1SYLA 4XJCA 1DUPA 3TQZA 4AO5A 3ZEZA 1F7PA 1F7RA 2J4HA 2Y8CA 3T60A 3TRLA 3ECYA 2HR6A 2R9QA 3SO2A 1TULA 3MDXA 3HZAA 3CA9A 5CCOA 1SEHA 3ARAA
chains in the Genus database with same CATH topology
1OGHA 3TPWA 1F7QA 4OOPA 3ARNA 2D4MA 1PKKA 2OL0A 3C3IA 1EU5A 2QXXA 3TQ4A 4B0HA 5ECTA 1F7OA 3TQ5A 1XS6A 5EDDA 2OKEA 3ZF3A 2HRMA 3T64A 3TPYA 2QLPA 1SMCA 3ZF4A 3MBQA 3H6DA 5F9KA 2XY3A 3GF0A 1XS1A 2ZDCA 5CCTA 2HQUA 4A6AA 3LOJA 1SJNA 2HXDA 1SM8A 2BAZA 2V9XA 1Q5UX 1DUDA 1F7DA 2Y1TA 3I93A 2D4LA 3ZF0A 3ZF6A 3ZF1A 3ZF5A 1RNJA 3T70A 1SLHA 3P48A 2BT1A 2PC5A 4AOOA 1DUNA 3T6YA 4DHKA 3TQ3A 2WE3A 3HHQA 3TPSA 4GV8A 2WE1A 1XS4A 2BSYA 1PKJA 2J4QA 1SIXA 1VYQA 2WE0A 2D4NA 2OKDA 1EUWA 2PY4A 3ZF2A 2YZJA 2XCEA 1PKHA 3LQWA 2WE2A 3TS6A 1DUCA 4GK6A 3EHWA 4WRKA 1MQ7A 3TRNA 3TTAA 4AOZA 4GCYA 4APZ1 3TSLA 2XCDA 1Q5HA 1RN8A 1SNFA 4LHRA 3KM3A 3TPNA 2OKBA 4OOQA 3H6XA 2XX6A 2HXBA 3C2TA 1F7NA 1DUTA 1F7KA 3F4FA 2OL1A 3TP1A 1SYLA 4XJCA 1DUPA 3TQZA 4AO5A 3ZEZA 1F7PA 1F7RA 2J4HA 2Y8CA 3T60A 3TRLA 3ECYA 2HR6A 2R9QA 3SO2A 3MDXA 3HZAA 3CA9A 5CCOA 1SEHA 3ARAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1OGH A;  3TPW A;  1F7Q A;  4OOP A;  3ARN A;  2D4M A;  1PKK A;  2OL0 A;  3C3I A;  1EU5 A;  2QXX A;  3TQ4 A;  4B0H A;  5ECT A;  1F7O A;  3TQ5 A;  1XS6 A;  5EDD A;  2OKE A;  3ZF3 A;  2HRM A;  3T64 A;  3TPY A;  2QLP A;  1SMC A;  3ZF4 A;  3MBQ A;  3H6D A;  5F9K A;  2XY3 A;  3GF0 A;  1XS1 A;  2ZDC A;  5CCT A;  2HQU A;  4A6A A;  3LOJ A;  1SJN A;  2HXD A;  1SM8 A;  2BAZ A;  2V9X A;  1Q5U X;  1DUD A;  1F7D A;  2Y1T A;  3I93 A;  2D4L A;  3ZF0 A;  3ZF6 A;  3ZF1 A;  3ZF5 A;  1RNJ A;  3T70 A;  1SLH A;  3P48 A;  2BT1 A;  2PC5 A;  4AOO A;  1DUN A;  3T6Y A;  4DHK A;  3TQ3 A;  2WE3 A;  3HHQ A;  3TPS A;  4GV8 A;  2WE1 A;  1XS4 A;  2BSY A;  1PKJ A;  2J4Q A;  1SIX A;  1VYQ A;  2WE0 A;  2D4N A;  2OKD A;  1EUW A;  2PY4 A;  3ZF2 A;  2YZJ A;  2XCE A;  1PKH A;  3LQW A;  2WE2 A;  3TS6 A;  1DUC A;  4GK6 A;  3EHW A;  4WRK A;  1MQ7 A;  3TRN A;  3TTA A;  4AOZ A;  4GCY A;  4APZ 1;  3TSL A;  2XCD A;  1Q5H A;  1RN8 A;  1SNF A;  4LHR A;  3KM3 A;  3TPN A;  2OKB A;  4OOQ A;  3H6X A;  2XX6 A;  2HXB A;  3C2T A;  1F7N A;  1DUT A;  1F7K A;  3F4F A;  2OL1 A;  3TP1 A;  1SYL A;  4XJC A;  1DUP A;  3TQZ A;  4AO5 A;  3ZEZ A;  1F7P A;  1F7R A;  2J4H A;  2Y8C A;  3T60 A;  3TRL A;  3ECY A;  2HR6 A;  2R9Q A;  3SO2 A;  3MDX A;  3HZA A;  3CA9 A;  5CCO A;  1SEH A;  3ARA A; 
#chains in the Genus database with same CATH topology
 1OGH A;  3TPW A;  1F7Q A;  4OOP A;  3ARN A;  2D4M A;  1PKK A;  2OL0 A;  3C3I A;  1EU5 A;  2QXX A;  3TQ4 A;  4B0H A;  5ECT A;  1F7O A;  3TQ5 A;  1XS6 A;  5EDD A;  2OKE A;  3ZF3 A;  2HRM A;  3T64 A;  3TPY A;  2QLP A;  1SMC A;  3ZF4 A;  3MBQ A;  3H6D A;  5F9K A;  2XY3 A;  3GF0 A;  1XS1 A;  2ZDC A;  5CCT A;  2HQU A;  4A6A A;  3LOJ A;  1SJN A;  2HXD A;  1SM8 A;  2BAZ A;  2V9X A;  1Q5U X;  1DUD A;  1F7D A;  2Y1T A;  3I93 A;  2D4L A;  3ZF0 A;  3ZF6 A;  3ZF1 A;  3ZF5 A;  1RNJ A;  3T70 A;  1SLH A;  3P48 A;  2BT1 A;  2PC5 A;  4AOO A;  1DUN A;  3T6Y A;  4DHK A;  3TQ3 A;  2WE3 A;  3HHQ A;  3TPS A;  4GV8 A;  2WE1 A;  1XS4 A;  2BSY A;  1PKJ A;  2J4Q A;  1SIX A;  1VYQ A;  2WE0 A;  2D4N A;  2OKD A;  1EUW A;  2PY4 A;  3ZF2 A;  2YZJ A;  2XCE A;  1PKH A;  3LQW A;  2WE2 A;  3TS6 A;  1DUC A;  4GK6 A;  3EHW A;  4WRK A;  1MQ7 A;  3TRN A;  3TTA A;  4AOZ A;  4GCY A;  4APZ 1;  3TSL A;  2XCD A;  1Q5H A;  1RN8 A;  1SNF A;  4LHR A;  3KM3 A;  3TPN A;  2OKB A;  4OOQ A;  3H6X A;  2XX6 A;  2HXB A;  3C2T A;  1F7N A;  1DUT A;  1F7K A;  3F4F A;  2OL1 A;  3TP1 A;  1SYL A;  4XJC A;  1DUP A;  3TQZ A;  4AO5 A;  3ZEZ A;  1F7P A;  1F7R A;  2J4H A;  2Y8C A;  3T60 A;  3TRL A;  3ECY A;  2HR6 A;  2R9Q A;  3SO2 A;  1TUL A;  3MDX A;  3HZA A;  3CA9 A;  5CCO A;  1SEH A;  3ARA A; 
#chains in the Genus database with same CATH homology
 1OGH A;  3TPW A;  1F7Q A;  4OOP A;  3ARN A;  2D4M A;  1PKK A;  2OL0 A;  3C3I A;  1EU5 A;  2QXX A;  3TQ4 A;  4B0H A;  5ECT A;  1F7O A;  3TQ5 A;  1XS6 A;  5EDD A;  2OKE A;  3ZF3 A;  2HRM A;  3T64 A;  3TPY A;  2QLP A;  1SMC A;  3ZF4 A;  3MBQ A;  3H6D A;  5F9K A;  2XY3 A;  3GF0 A;  1XS1 A;  2ZDC A;  5CCT A;  2HQU A;  4A6A A;  3LOJ A;  1SJN A;  2HXD A;  1SM8 A;  2BAZ A;  2V9X A;  1Q5U X;  1DUD A;  1F7D A;  2Y1T A;  3I93 A;  2D4L A;  3ZF0 A;  3ZF6 A;  3ZF1 A;  3ZF5 A;  1RNJ A;  3T70 A;  1SLH A;  3P48 A;  2BT1 A;  2PC5 A;  4AOO A;  1DUN A;  3T6Y A;  4DHK A;  3TQ3 A;  2WE3 A;  3HHQ A;  3TPS A;  4GV8 A;  2WE1 A;  1XS4 A;  2BSY A;  1PKJ A;  2J4Q A;  1SIX A;  1VYQ A;  2WE0 A;  2D4N A;  2OKD A;  1EUW A;  2PY4 A;  3ZF2 A;  2YZJ A;  2XCE A;  1PKH A;  3LQW A;  2WE2 A;  3TS6 A;  1DUC A;  4GK6 A;  3EHW A;  4WRK A;  1MQ7 A;  3TRN A;  3TTA A;  4AOZ A;  4GCY A;  4APZ 1;  3TSL A;  2XCD A;  1Q5H A;  1RN8 A;  1SNF A;  4LHR A;  3KM3 A;  3TPN A;  2OKB A;  4OOQ A;  3H6X A;  2XX6 A;  2HXB A;  3C2T A;  1F7N A;  1DUT A;  1F7K A;  3F4F A;  2OL1 A;  3TP1 A;  1SYL A;  4XJC A;  1DUP A;  3TQZ A;  4AO5 A;  3ZEZ A;  1F7P A;  1F7R A;  2J4H A;  2Y8C A;  3T60 A;  3TRL A;  3ECY A;  2HR6 A;  2R9Q A;  3SO2 A;  3MDX A;  3HZA A;  3CA9 A;  5CCO A;  1SEH A;  3ARA A; 
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