4J7CI

Ktrab potassium transporter from bacillus subtilis
Total Genus 131
50100150200250300350400020406080100120
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
131
sequence length
431
structure length
429
Chain Sequence
TPPQVLAIGFFLTIIIGAVLLMLPISTTKPLSWIDALFTAASATTVTGLAVVDTGTQFTVFGQTVIMGLIQIGGLGFMTFAVLIVMILKIGLKERMLVQEALNQPTIGGVIGLVKVLFLFSISIELIAALILSIRLVPQYGWSSGLFASLFHAISAFNNAGFSLWPDNLMSYVGDPTVNLVITFLFITGGIGFTVLFDVMKNRRFKTFSLHTKLMLTGTLMLNAIAMLTVFILEYSNPGTLGHLHIVDKLWASYFQAVTPRTAGFNSLDFGSMREGTIVFTLLLMFIGAGSASTASGIKLTTFIVILTSVIAYLRGKKETVIFRRSIKYPIIIKALAVSVTSLFIVFLGIFALTITEQAPFLQIVFETFSAFGTVGLTMGLTPELTTAGKCIIIVIMFIGRIGPLTFVFSFAKTEQSNIRYPDGEVFTG
50100150200250300350400400300200100
020406080100120Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH17 (403-418)EMPTYAH3 (68-71)TII1 (123-126)AH4 (74-89)TI6 (398-401)AH7 (126-152)TI1 (154-157)TIV1 (153-156)TIV2 (157-160)AH12 (263-273)AH8 (160-174)TIV3 (181-184)TIV4 (183-186)TIV7 (253-256)3H2 (186-188)TI2 (188-191)AH10 (209-218)TI3 (221-224)TIV5 (220-223)AH11 (226-250)TI4 (274-277)TIV6 (250-253)TVIII3 (254-257)TIV8 (255-258)TIV9 (257-260)TIV10 (273-276)TIV11 (276-279)TIV12 (282-285)TVIII4 (275-278)AH13 (291-302)TIV13 (285-288)TIV14 (286-289)TIV15 (306-309)TIV16 (312-315)S2 (341-342)TIV17 (337-340)TI5 (397-400)TIV19 (394-397)TIV20 (396-399)AH18 (420-425)AH5 (91-102)TVIII5 (333-336)AH9 (192-206)AH14 (316-331)S1 (337-338)AH15 (345-370)TIV18 (370-373)3H1 (38-40)AH1 (15-36)TVIII1 (41-44)AH2 (47-59)AH16 (377-389)TVIII2 (64-67)AH6 (108-118)Updating...
connected with : NaN
publication title The structure of the KtrAB potassium transporter
pubmed doi rcsb
molecule keywords Ktr system potassium uptake protein A
molecule tags Transport protein
source organism Bacillus subtilis
total genus 131
structure length 429
sequence length 431
chains with identical sequence J, K, L
ec nomenclature
pdb deposition date 2013-02-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF02386 TrkH Cation transport protein
Image from the rcsb pdb (www.rcsb.org)
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