4CVDA

Crystal structure of the central repeat of cell wall binding module of cpl7
Total Genus 16
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
16
sequence length
48
structure length
48
Chain Sequence
LTTVANEVIQGLWGNGQERYDSLANAGYDPQAVQDKVNEILNAREIAD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords LYSOZYME
publication title Deciphering how Cpl-7 cell wall-binding repeats recognize the bacterial peptidoglycan.
pubmed doi rcsb
source organism Streptococcus phage cp-7
total genus 16
structure length 48
sequence length 48
ec nomenclature ec 3.2.1.17: Lysozyme.
pdb deposition date 2014-03-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF08230 CW_7 CW_7 repeat
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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