5JKFA

Crystal structure of esterase e22
Total Genus 129
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
129
sequence length
369
structure length
369
Chain Sequence
MVEKRVFEMPHFTTFGGKQIKNVKVGWEAYGTLNDAKSNVILITHYFSGSSHAAGKYDENDPAPGYWDSIIGPGKAIDTDRFYVISVDTLANLNAYDPHVITTGPTSINPDTGKPYGLDFPVVTIRDFVNVQKALLESLGISKLYAVIGPSMGSMQAIDWASAYPGWVERMISVIGAGQSDAWTTAALEHWATPITLDKNWNNGAYSKEQAPLNGLAASLMLITQNALTPSFFNQTGNTLGYKNVESAPLNDIRQSHSIVNWLRERAKTRAKSMDANHLLYLVRACQLFVAGHQGNLEQGLASIKAKTLFIPAQTDLLLMPYLSQSAHQGLTSMNNDSTLVTLNGKLGHLEGVTNVSAQAQAIRQFLEN
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title Structural basis for substrate recognition and catalysis of a novel esterase E22 with a homoserine transacetylase-like fold
rcsb
source organism Uncultured bacterium
molecule tags Hydrolase
molecule keywords Esterase E22
total genus 129
structure length 369
sequence length 369
chains with identical sequence B
ec nomenclature
pdb deposition date 2016-04-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00561 Abhydrolase_1 alpha/beta hydrolase fold
Image from the rcsb pdb (www.rcsb.org)
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...