5XI0A

Crystal structure of fabv, a new class of enyl-acyl carrier protein reductase from vibrio fischeri
Total Genus 145
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
145
sequence length
400
structure length
400
Chain Sequence
b'MIIKPRIRGFICTTTHPVGCEQNVKEQIALTKAQGPIANAPKRVLVVGSSSGYGLSSRITAAFGGGASTIGVFFEKAGTEKKPGTAGWYNSAAFDKFAKEEGLYSKSLNGDAFSNEAKQKTIDLIKEDLGQIDMVVYSLASPVRKMPETGEVIRSSLKPIGETYTATAVDTNKDAIIEASVEPATEQEIKDTVTVMGGEDWELWINALSEAGVLADGCKTVAYSYIGTELTWPIYWDGALGQAKMDLDRAATALNEKLSATGGTANVAVLKSVVTQASSAIPVMPLYIAMVFKKMREEGVHEGCQEQILRMFSQRLYKADGSAAEVDEKNRLRLDDWELREDIQQHCRDLWPQVTTENLKDLTDYVEYKEEFLKLFGFGVDGVDYDADVNPEVNFDVADI'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Enoyl-[acyl-carrier-protein] reductase [NADH]
publication title Crystal structure of FabV, a new class of enyl-acyl carrier protein reductase from Vibrio fischeri
rcsb
source organism Vibrio fischeri (strain atcc 700601 / es114)
molecule tags Oxidoreductase
total genus 145
structure length 400
sequence length 400
chains with identical sequence B
ec nomenclature ec 1.3.1.9: Enoyl-[acyl-carrier-protein] reductase (NADH).
pdb deposition date 2017-04-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07055 Eno-Rase_FAD_bd Enoyl reductase FAD binding domain
A PF12241 Enoyl_reductase Trans-2-enoyl-CoA reductase catalytic region
A PF12242 Eno-Rase_NADH_b NAD(P)H binding domain of trans-2-enoyl-CoA reductase
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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