5YGVA

Crystal structure of the abscisic acid receptor pyr1 in complex with an antagonist
Total Genus 46
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
46
sequence length
177
structure length
168
Chain Sequence
ELTPEERSELKNSIAEFHTYQLDPGSCSSLHAQRIHAPPELVWSIVRRFDKPQTYKHFIKSCSVEQNFEMRVGCTRDVIVISGLPANTSTERLDILDDERRVTGFSIIHRLTNYKSVTTVHRFEKENRIWTVVLESYVVDMPDTRMFADTVVKLNLQKLATVAEAMAR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hormone receptor
molecule keywords Abscisic acid receptor PYR1
publication title Structure-Based Chemical Design of Abscisic Acid Antagonists That Block PYL-PP2C Receptor Interactions.
pubmed doi rcsb
source organism Arabidopsis thaliana
total genus 46
structure length 168
sequence length 177
chains with identical sequence B
ec nomenclature
pdb deposition date 2017-09-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03364 Polyketide_cyc Polyketide cyclase / dehydrase and lipid transport
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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