6IEJA

The c2 domain of cytosolic phospholipase a2 alpha bound to phosphatidylcholine
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
126
structure length
126
Chain Sequence
SYSHVFTVTVRKATNVTKGAIGDMLDTPDPYVELFIPSAPDCRKRTKHFNNDVNPVWNETFEFILDPNQDNVLEVTLMDANYVMDETLGMATFPISSLKLGEKKEVQLTFNNVTEMTLELSLEVCS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of phosphatidylcholine recognition by the C2-domain of cytosolic phospholipase A2alpha.
pubmed doi rcsb
molecule tags Hydrolase
source organism Gallus gallus
molecule keywords Cytosolic phospholipase A2
total genus 27
structure length 126
sequence length 126
chains with identical sequence B, C
ec nomenclature ec 3.1.1.4: Phospholipase A(2).
pdb deposition date 2018-09-14
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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