6M8RA

Crystal structure of the kctd16 btb domain in complex with gabab2 peptide
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
102
structure length
95
Chain Sequence
FPEVVELNVGGQVYFTRHSTLISIPHSLLWKMFSDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYFQLPDLVKLLTP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis for KCTD-mediated rapid desensitization of GABABsignalling.
pubmed doi rcsb
molecule tags Protein binding
source organism Homo sapiens
molecule keywords BTB/POZ domain-containing protein KCTD16
total genus 23
structure length 95
sequence length 102
chains with identical sequence B, C, D, E, F, G, H, I, J
ec nomenclature
pdb deposition date 2018-08-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02214 BTB_2 BTB/POZ domain
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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