6STHA

Highly cationic rsl-r8 in complex with sulfonato-calix[8]arene
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
90
structure length
90
Chain Sequence
SSVQTAATSWGTVPSIRVYTANNGRITERCWDGRGWYTGAFNRPGRNVSVTSWLVGSAIHIRVYASTGTTTTEWCWDGNGWTRGAYTATN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Sugar binding protein
molecule keywords Fucose-binding lectin protein
publication title Highly cationic RSL-R8 in complex with sulfonato-calix[8]arene
rcsb
source organism Ralstonia solanacearum
total genus 12
structure length 90
sequence length 90
chains with identical sequence B
ec nomenclature
pdb deposition date 2019-09-10
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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