7BNTC

Complex of rice blast (magnaporthe oryzae) effector protein avr-pikd with a predicted ancestral hma domain of pik-1 from oryza spp.
Total Genus 14
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
14
sequence length
84
structure length
83
Chain Sequence
KRAIDLSRERDPNFFDHPGIPVPECFWFMFKNNVRQDAGTCYSSWKMDMVGPNWVHIKSDDNCNLSGDFPPGWIVLGKKRPGF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Two NLR immune receptors acquired high-affinity binding to a fungus effector through convergent evolution of their integrated domain
rcsb
molecule tags Protein binding
source organism Synthetic construct
molecule keywords Predicted ancestral HMA domain of Pik-1 from Oryza spp.
total genus 14
structure length 83
sequence length 84
ec nomenclature
pdb deposition date 2021-01-22
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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