7DEAA

Structure of an avian influenza h5 hemagglutinin from the influenza virus a/duck northern china/22/2017 (h5n6)
Total Genus 71
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
71
sequence length
319
structure length
319
Chain Sequence
DQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLNGVKPLILKDCSVAGWLLGNPMCDEFIRVPEWSYIVERANPANDLCYPGNLNDYEELKHLLSRINHFEKTQIIPKSSWPNHTSSGVSAACPYQGMPSFFRNVVWLTKKNDAYPTIRMSYNNTNREDLLILWGIHHSNNAEEQTNLYKNPTTYVSVGTSTLNQRLVPKIATRSQVNGQRGRMDFFWTILRPNDAIHFESNGNFIAPEYAYKIIKTGDSTIMKSEMEYGNCNTKCQTPIGAINSSMPFHNIHPLTIGECPKYVKSNKLVLATGLRNN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Haemagglutinin and neuraminidase acid stability in H5N6 avian influenza virus confers infection adaptation in mammals
rcsb
molecule tags Viral protein
source organism Influenza a virus
molecule keywords Hemagglutinin
total genus 71
structure length 319
sequence length 319
chains with identical sequence C, E
ec nomenclature
pdb deposition date 2020-11-03
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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