7MOQ | Genus

Total Genus 107

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	107
sequence length	439
structure length	429
Chain Sequence	MREVISIHVGQGGIQVGNACWELFCLEHGIQPDGQMPAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSILSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPANMMAKCDPRHGKYMACSMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIET

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Structural protein
publication title	Remodeling and activation mechanisms of outer arm dyneins revealed by cryo-EM. pubmed doi rcsb
molecule keywords	Dynein-1-alpha heavy chain, flagellar inner arm I1 complex protein, putative
total genus	107
structure length	429
sequence length	439
chains with identical sequence	S, W, r, s, w
ec nomenclature
pdb deposition date	2021-05-03

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
R	PF00091	Tubulin	Tubulin/FtsZ family, GTPase domain
R	PF03953	Tubulin_C	Tubulin C-terminal domain

Image from the rcsb pdb (www.rcsb.org)

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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7MOQR

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations