7N1PSE

Elongating 70s ribosome complex in a classical pre-translocation (pre-c) conformation
Total Genus 35
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
35
sequence length
158
structure length
158
Chain Sequence
ELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSVEEILGK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of early translocation events on the ribosome
doi rcsb
molecule keywords 16S rRNA
molecule tags Ribosome
source organism Escherichia coli k-12
total genus 35
structure length 158
sequence length 158
ec nomenclature
pdb deposition date 2021-05-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
SE PF00333 Ribosomal_S5 Ribosomal protein S5, N-terminal domain
SE PF03719 Ribosomal_S5_C Ribosomal protein S5, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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