7OLDSd

Thermophilic eukaryotic 80s ribosome at pe/e (ti)-post state
Total Genus 3
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
3
sequence length
52
structure length
52
Chain Sequence
ESVWNSRPRTYGKGSRACRVCTHQAGLIRKYGLNICRQCFREKAADIGFVKY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title High-resolution structures of a thermophilic eukaryotic 80S ribosome reveal atomistic details of translocation.
pubmed doi rcsb
molecule tags Ribosome
molecule keywords 26S rRNA
total genus 3
structure length 52
sequence length 52
ec nomenclature
pdb deposition date 2021-05-19
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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