7PA5B

Complex between the beta-lactamase cmy-2 with an inhibitory nanobody
Total Genus 22
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
124
structure length
122
Chain Sequence
QVQLVESGGGMVQPGGSLRLSCAASGFTFSNYDMSWVRRAPGKGPEWVSTINTGGGSTSYADSVKGRFTISRDNAKNTLYLQMNSLKPEDTALYYCTIDRGLHYSDLYDYWGQGTQVTVSSH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Complex Between the Beta-lactamase CMY-2 with an Inhibitory Nanobody
rcsb
molecule tags Hydrolase
source organism Escherichia coli
molecule keywords Beta-lactamase
total genus 22
structure length 122
sequence length 124
ec nomenclature
pdb deposition date 2021-07-29
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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