7PEKA

Crystal structure of triosephosphate isomerase c216a mutant from schizosaccharomyces pombe (sptim c216a)
Total Genus 96
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
96
sequence length
246
structure length
246
Chain Sequence
RKFFVGGNFKMNGSLESMKTIIEGLNTTKLNVGDVETVIFPQNMYLITTRQQVKKDIGVGAQNVFDKKNGAYTGENSAQSLIDAGITYTLTGHSERRTIFKESDEFVADKTKFALEQGLTVVACIGETLAEREANTINVVVRQLNAIADKVQNWSKIVIAYEPVWAIGTGKTATPEQAQEVHAEIRKWATNKLGASVAEGLRVIYGGSVNGGNAKEFLKFHDIDGFLVGGASLKPEFHNIVNVHSL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of Triosephosphate Isomerase from Schizosaccharomyces pombe (SpTIM C216A)
rcsb
molecule tags Isomerase
source organism Schizosaccharomyces pombe (strain 972 / atcc 24843)
molecule keywords Triosephosphate isomerase
total genus 96
structure length 246
sequence length 246
chains with identical sequence B, C, D
ec nomenclature ec 5.3.1.1: triose-phosphate isomerase.
pdb deposition date 2021-08-10
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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