7QGKA

The mrubyft protein, genetically encoded blue-to-red fluorescent timer in its red state
Total Genus 64
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
64
sequence length
218
structure length
217
Chain Sequence
ELIKENMRMKVVMEGSVNGHQFKCTGEGEGNPYMGTQTMRIKVIEGGPLPFAFDILATSFSRTFIKYPKGIPDFFKQSFPEGFTWERVTRYEDGGVVTVMQDTSLEDGCLVYHVQVRGVDFPSNGPVMQKKTKGWEPSTEMMYPADGGLRGYTHMALKVDGGGHLSCSFVTTYRSKKTVGNIKMPGIHAVDHRLERLEESDNEMFVVLREHSVAKFA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The mRubyFT Protein, Genetically Encoded Blue-to-Red Fluorescent Timer.
pubmed doi rcsb
molecule keywords The red form of the mRubyFT protein, Genetically Encoded Blue-to-Red Fluorescent Timer
molecule tags Fluorescent protein
source organism Entacmaea quadricolor
total genus 64
structure length 217
sequence length 218
ec nomenclature
pdb deposition date 2021-12-08
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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