7QINF

In situ structure of actomyosin complex in skeletal sarcomere
Total Genus 28

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
28
sequence length
105
structure length
105
Chain Sequence
XXXXXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXX

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH5 (75-87)EMPTYAH3 (40-51)AH1 (5-17)AH4 (54-67)AH6 (89-102)AH2 (19-31)Updating...
connected with : NaN
molecule tags Contractile protein
publication title Structures from intact myofibrils reveal mechanism of thin filament regulation through nebulin.
pubmed doi rcsb
molecule keywords Actin, alpha skeletal muscle
total genus 28
structure length 105
sequence length 105
ec nomenclature
pdb deposition date 2021-12-15
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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