7ST6F

Pre translocation, non-rotated 70s ribosome (structure i)
Total Genus 3
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
3
sequence length
38
structure length
38
Chain Sequence
MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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publication title Time-resolved cryo-EM visualizes ribosomal translocation with EF-G and GTP.
pubmed doi rcsb
molecule tags Ribosome
molecule keywords 16S rRNA
total genus 3
structure length 38
sequence length 38
ec nomenclature
pdb deposition date 2021-11-12
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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