7THMB

Sars-cov-2 nsp12/7/8 complex with a native n-terminus nsp9
Total Genus 17

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
17
sequence length
112
structure length
108
Chain Sequence
AKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDAKIVQLSEISNSPNLAWPLIVTALRAN

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (81-94)EMPTYTI1 (94-97)AH2 (100-109)Updating...
connected with : NaN
molecule tags Viral protein
source organism Severe acute respiratory syndrome coronavirus 2
publication title The mechanism of RNA capping by SARS-CoV-2.
pubmed doi rcsb
molecule keywords RNA-directed RNA polymerase
total genus 17
structure length 108
sequence length 112
chains with identical sequence D
ec nomenclature ec 2.1.1.56: mRNA (guanine-N(7))-methyltransferase.
pdb deposition date 2022-01-11
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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