7XF1A

Crystal strucutre of apocasding in complex with ssdna
Total Genus 189

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
189
sequence length
622
structure length
594
Chain Sequence
PADALPGEGAVREVLRPLLKQAAEKTAAGKIVFAEAATGTGKGRMIASLAAAAAIKGDTVVVSAPLAVTWQLVNDMKDIPEVRRVGLTLSLGRPNFISPQRTLEWAIDNERADLAAWIEGGGKPLSLRSMETSKVISHELCWLLEDALLLAEDLPADSLLLTSEDPADCPAQQLYVAMRSNYTEAGIILCSHFMLAAHTRMMQMRLSLPHFIDTLIVDEAHLLEQAFASVYTHTLRLRPLMRTIEGLDALKELFTQMQVATNTSLNVPLSDVPELIPALKDTVKTLGALPTKGMSRDARSVIRIATRAANDALSGHSRLRIEVTPVHSYPMLLSGRSNLQRALLGLWNATGGATLVSATLFTTGDNGSLTRWKLEVPTERAAFLPPVHPAWTTAPVLLHKEFCAHEPDDSPEWATECAQTIQGVASTAQGGTLVLCTSYQNTELLAGRLGAALGDRLIVQSKTSSAATCLAQFKAKHKAGIRPVWLGLGAAWTGIDLSDHSLPDNPELDRLLSDLVITRIPVGQNRSLTHERRTAIGGFRIISQEAAWHFRQGLGRLVRRPGVTHKNLWVLDARIYGGAAWVAPFRQILDRYKK

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Structural protein/dna
source organism Pseudomonas aeruginosa
publication title Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment.
pubmed doi rcsb
molecule keywords CasDinG
total genus 189
structure length 594
sequence length 622
ec nomenclature
pdb deposition date 2022-03-31
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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