7XLIB

Crystal structure of isdb linker-neat2 bound to a nanobody (vhh)
Total Genus 31
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
31
sequence length
125
structure length
125
Chain Sequence
ELQLVESGGGLVQPGGSLSLSCEVSGFSFDDVDNFIIAWFRQAPGKEREGVSFLRKYDMSTYYAESVKGRFTISSDNARDTVYLQMTNLKPEDTAVYYCALDREGFVFEQGMDFWGKGTQVTVSS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Generation of a specific antibody against the linker-NEAT3 region of the IsdH protein of S. aureus inhibiting bacterial growth under iron limiting conditions
rcsb
molecule keywords Fur-regulated protein B
molecule tags Metal transport
source organism Staphylococcus aureus
total genus 31
structure length 125
sequence length 125
ec nomenclature
pdb deposition date 2022-04-21
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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