7Y8YB

Structure of cas7-11-crrna-tgrna in complex with tpr-chat
Total Genus 171

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
171
sequence length
703
structure length
680
Chain Sequence
PTREDIDRKEAERLLDEAFNPRTKPVDRKKIINSALKILIGLYKEKKDDLTSASFISIARAYYLVSITILPKGTTIPEKKKEALRKGIEFIDRAINKFNGSILDSQRAFRIKSVLSIEFNRIDREKCDNIKLKNLLNEAVDKGCTDFDTYEWDIQIAIRLCELGVDMEGHFDNLIKSNKANDLQKAKAYYFIKKDDHKAKEHMDKCTASLKYTPCSHRLWDETVGFIERLKGDSSTLWRDFAIKTYRSCRVQEKETGTLRLRWYWSRHRVLYDMAFLAVKEQADDEEPDVNVKQAKIKKLAEISDSLKSRFSLRLSDMEKMPKSDDESNHEFKKFLDKCVTAYQDGYVINRAKLLELTQVPEGWVVVHFYLNKLEGMGNAIVFDKCANSWQYKEFQYKELFEVFLTWQANYNLYKENAAEHLVTLCKKIGETMPFLFCDNFIPNGKDVLFVPHDFLHRLPLHGSIENKTNGKLFLENHSCCYLPAWSFASEKEASTSDEYVLLKNFDQGHFETLQNNQIWGTQSVKDGASSDDLENIRNNPRLLTILCHGEANMSNPFRSMLKLANGGITYLEILNSVKGLKGSQVILGACETDLVPPLSDVMDEHYSVATALLLIGAAGVVGTMWKVRSNKTKSLIEWKLENIEYKLNEWQKETGGAAYKDHPPTFYRSIAFRSIGFPL
100200300400500600600500400300200100
050100150Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Immune system/rna
source organism Candidatus scalindua brodae
publication title Structure of Cas7-11-crRNA-tgRNA in complex with TPR-CHAT
rcsb
molecule keywords CHAT domain protein
total genus 171
structure length 680
sequence length 703
ec nomenclature
pdb deposition date 2022-06-24
Image from the rcsb pdb (www.rcsb.org)
7XC7D 7XSQB 7XSRC 7XSSC 7Y83D 7Y84C 7Y85D 7Y8TB 7XT4C
similar chains in the Genus database (40% sequence similarity)
None
similar chains in the pdb database (40% sequence similarity)

 
#similar chains in the Genus database (40% sequence similarity)
7XC7 D; 7XSQ B; 7XSR C; 7XSS C; 7Y83 D; 7Y84 C; 7Y85 D; 7Y8T B; 
#similar chains, but unknotted
7XT4 C; 
#similar chains in the pdb database (40% sequence similarity)


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