7ZOD3

70s e. coli ribosome with an extended ul23 loop from candidatus marinimicrobia
Total Genus 7
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
7
sequence length
55
structure length
55
Chain Sequence
AVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRGRKVIA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Modulating co-translational protein folding by rational design and ribosome engineering.
pubmed doi rcsb
molecule tags Ribosome
molecule keywords 50S ribosomal protein L28
total genus 7
structure length 55
sequence length 55
ec nomenclature
pdb deposition date 2022-04-25
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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