8BK2A

X-ray structure of meningococcal factor h binding protein variant 2 in complex with a specific and bactericidal human monoclonal antibody 1b1
Total Genus 35
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
35
sequence length
186
structure length
176
Chain Sequence
DKVSRFDFIRQIEVDGQLITLESGEFQIYKQDHSAVVALQIEKINQRSFLVSGLGGEHTAFNQLPDGKAEYHGKAFSSDDAGGKLTYTIDFAAKQGHGKIEHLKTPEQNVELAAAELKADEKSHAVILGDTRYGSEEKGTYHLALFGDRAQEIAGSATVKIGEKVHEIGIAGKQLE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Bactericidal human monoclonal antibody 1B1 specific for meningococcal factor H binding protein variant 2 and displaces human factor H
rcsb
molecule tags Protein binding
source organism Neisseria meningitidis serogroup b
molecule keywords Factor H-binding protein
total genus 35
structure length 176
sequence length 186
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2022-11-08
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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