8C8LA

In vitro structure of the nitrosopumilus maritimus s-layer - two-fold symmetry (c2)
Total Genus 271
20040060080010001200050100150200250
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
271
sequence length
1327
structure length
1327
Chain Sequence
ANANLFVSAENSQFDNYMSGPQVIEVVVIDSDINDTDEAKGEPDVTVNGKVLRMVQAVDGNWYGYFADRDQAQIADSTATTADSGLDFGVFCASSSGTAALGFSTTETDGIAIPITIANATATGNGTQTGSSSGGAITTTCAANTLDASTANGTINVVREAKDPVAASGSVSVGQIGLKNGTANSGPNWPFIQLYELNPTGNVVVQYNKGGGVQSTTLTFDTVDQFAELSLDRTVFPRVSQVHATITDLWLNIDPTDEDSWTFATNTKNTTSSFNVDTFYQVFDENGASGGSALTLRTTLSSLMCEDNCVLTLDVDAQSSGTPVVTIQDNGDSILTQLNASSNTNANNASAFGISTETAKLGTGSIPVTITEQGPNSGVFGTYDESDKSVLKITDNAKRGTSASLDYNETPQTILVGFSFASIDIQPVTDEWTSGQEIPVVIVDADQNKNSRADEDLDLNNPDVTLIPALRTGDPFTIDEGGTPSLIFTNGTNGDDSIFDTGAINNTSAGQVGNFTLNINVTRFSSATNITSTESIDTFSKRLISAQTANSSANFDVDFAIIDLGSATLETLKETVVDEDNTAVGFNFFNYDVRSLGADTVSIALLNTTGNILPWVNNDTRNVDKNNAILLVSNSTNSQAYVDLTNAVSDAVYGSTNTDSNVNIGFAMYFTGVGDLAAKEVIVMDFFSFGFTDDGVQSSERFANQIIRIEAEETGDNTSTFEGSLEYVMVNQINIQDAGTFSGITPIADDPSFIVIEDLTDEDAPRVNYNDLGADGVTTPVSDQEEAPSHSGVVSLNADSYKIADTVVITVEDLDLNVDSDLIDIFTVVSDNSKATDDAVGSATTQSLSFGELGRLLDVTFDDVIWSTPDGANNTATGNDSDTCSTELSNAGITDTGLGATGFTLVETGAATGVFVGDFQIPSFWCRVSDTTTTPYTYAGDEETTTGLDIEVNYVDFRDASGEIVEVGDSAGVRANTGSVSLDRTVYPVPFGTIADSSKAANAAPNGRSVFPIHATGITSTIDSTEELPTGDLTIHVRINDPDFDENPAGEDAMDQDNALKISVIRGSDSVVLGYAGASERTGKIDVGGNNGTISNIRSFGEMDEIAPDAGIFELDVNIKFTDGPASAQCNSHDTLYTALDGTTGKADTNRFDDGAASGQEYCILQGDILQVEYTDPADASGDANTVTDSATFDLRNGVLQSDKSVYIIGSDMILTLIEPDFDLDNDSAETYDLDLIEWDSDAATTTMGNKGVTGAAAAFDPEPTDFRETGDSTGIFQIVIEIPESLSNDKLERGEEIILEYTDWGPSGSDYVGDEDEDVNLTIYTS
2004006008001000120012001000800600400200
050100150200250Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Structural protein
publication title Membrane-less channels sieve cations in ammonia-oxidising marine archaea
rcsb
molecule keywords Cell surface protein
total genus 271
structure length 1327
sequence length 1327
chains with identical sequence B, C, D, E, F
ec nomenclature ec ?:
pdb deposition date 2023-01-20
Image from the rcsb pdb (www.rcsb.org)
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

Application loaded.