8CIEA

Crystal structure of the human cdkl5 kinase domain with compound yl-354
Total Genus 75
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
75
sequence length
291
structure length
280
Chain Sequence
FEILGVVGEGAYGVVLKCRHKETHEIVAIKKFKEVKETTLRELKMLRTLKQENIVELKEAFLYLVFEYVEKNMLELLEEMPNGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGNNANYDEEVATRWYRSPELLLGAPYGKSVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPSEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILNSVLLDLMKNLLKLDPADRYLTEQCLNHPTFQTQRLL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Cyclin-dependent kinase-like 5
publication title Discovery of a Potent and Selective CDKL5/GSK3 Chemical Probe That Is Neuroprotective
doi rcsb
source organism Homo sapiens
total genus 75
structure length 280
sequence length 291
ec nomenclature ec 2.7.11.22: cyclin-dependent kinase.
pdb deposition date 2023-02-09
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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