8CMJn

Translocation intermediate 4 (ti-4*) of 80s s. cerevisiae ribosome with eef2 in the absence of sordarin
Total Genus 2
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
2
sequence length
65
structure length
33
Chain Sequence
EDRNKIHQYLFLTSKGYVKTQFSWQYYYYTLTE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Cryo-EM analysis of eukaryotic ribosome translocation intermediates
rcsb
molecule tags Ribosome
molecule keywords 40S ribosomal protein S24-A
total genus 2
structure length 33
sequence length 65
ec nomenclature
pdb deposition date 2023-02-20
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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