8EHEA

Structure of tannerella forsythia potempin c in complex with mirolase
Total Genus 120
50100150200250300350020406080100120
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
120
sequence length
353
structure length
353
Chain Sequence
ETQTDPLYPQQYYLNNTGQFGGTNNIDINAPEAWNITTGNTSVRVAVIDDGVEAHEDMAGRLLPGFTARSSAENPNRNGAPNNTNPPSTPYPNDNDSPIGHGQACAGIIAANHNGMGIRGIAPQVRIIPINIFNDWFIDQIFNGYYWMDFVRYRETVQDIANAIDAAWDTHSADILSNSWGYGTTPNSADAIVAAINRARTQGRDGRGCPVIFASGNAWGQQGVTDVAFPGNVEGVITVGAIDNRGNIWNYSQRGASMDLVAPSGGVPGNIVTTDRMGNFGYNNTNYTNTFNGTSAACPQVAGVAALMLSVRPDLTEAQVRTILQNTARDLGSAGFDNTYGYGLVDAHAAVAP
5010015020025030035035030025020015010050
020406080100120Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTIV5 (325-328)S3 (308-313)TI3 (194-197)TII1 (205-208)3H2 (201-203)TI1 (187-190)TI2 (193-196)TVIII1 (195-198)TIV1 (198-201)TIV4 (313-316)AH1 (212-217)S1 (226-231)TI5 (237-240)TI6 (253-256)S2 (248-249)TI'1 (259-262)TIV2 (238-241)TVIII3 (264-267)TVIII2 (254-257)AH2 (283-292)TI7 (273-276)AH3 (339-351)S5 (329-335)3H1 (190-192)TI4 (222-225)S4 (318-324)TI8 (304-307)TIV3 (302-305)TII2 (240-243)Updating...
connected with : NaN
molecule tags Hydrolase inhibitor
source organism Tannerella forsythia
publication title A unique network of attack, defence and competence on the outer membrane of the periodontitis pathogen Tannerella forsythia.
pubmed doi rcsb
molecule keywords Mirolase
total genus 120
structure length 353
sequence length 353
ec nomenclature
pdb deposition date 2022-09-14
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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