8GWMC

Sars-cov-2 e-rtc bound with mmp-nsp9 and gmppnp
Total Genus 21
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
21
sequence length
72
structure length
72
Chain Sequence
KMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analog inhibitors.
pubmed doi rcsb
molecule tags Viral protein/inhibitor
source organism Severe acute respiratory syndrome coronavirus 2
molecule keywords RNA-directed RNA polymerase
total genus 21
structure length 72
sequence length 72
ec nomenclature ec 2.7.7.50: mRNA guanylyltransferase.
pdb deposition date 2022-09-17
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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