8HCSA

Zebrafish irf-11 dbd
Total Genus 20
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
20
sequence length
106
structure length
91
Chain Sequence
RLRPWLEEQIQSGRYPGVQWLDQSARVFQIPWKNIDKDATLFRNWAIHTGRYKPGIDKPDPKTWKANFRCALNSLTDVKELQDAFRVYALL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Dna binding protein
molecule keywords Interferon regulatory factor
publication title Structure of Danio rerio IRF10 and IRF11 bound DNA reveal determinants of interferon regulation
rcsb
source organism Danio rerio
total genus 20
structure length 91
sequence length 106
ec nomenclature
pdb deposition date 2022-11-03
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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