The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
140
|
sequence length |
388
|
structure length |
386
|
Chain Sequence |
SYYTQVPPAGTQVEGSTKLFSPLTIRGVTFPNRLFLAPLCQYSAKDGYANDWHLTHIGGIVQRGPGLAIMEATAVQKVGRITPQDLGLYDDGHIEPLKRITEFAHSQSQKIGIQLAHAGRKASAVAPWLSGNAMAVKEVGGWPDDIVAPSAIPQEEGINAVPKVLTGEDIGVLKKDWAEAAKRAVRANFDAIEIHAAHGYLLHQFLSPVSNRRTDKYGGSFENRVRILLEICEEVRAVIPTAMPLLVRISATDWFEFDDNLTKEFPESWTVAQSIRLALLLADRGVDLVDVSSGGIHAKSAIAIRSGPGYQVHFAQEIKKAVGEKLLISAVGGIKTGALAEEVVQSGIDAVQAGRWFQQNPGLVRAFANELGVKVRMATQIDWSFE
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| publication title |
The structure of a novel thermophilic-like old yellow enzyme from Aspergillus flavus-AfOYE1
rcsb |
| molecule tags |
Biosynthetic protein
|
| source organism |
Aspergillus flavus (strain atcc 200026 / fgsc a1120 / iam 13836 / nrrl 3357 / jcm 12722 / srrc 167)
|
| molecule keywords |
NADPH dehydrogenase afvA
|
| total genus |
140
|
| structure length |
386
|
| sequence length |
388
|
| chains with identical sequence |
B
|
| ec nomenclature | |
| pdb deposition date | 2023-04-21 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the Genus database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
