8JJRa

Cryo-em structure of symbiodinium photosystem i
Total Genus 233
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
233
sequence length
687
structure length
665
Chain Sequence
AIFRYVNATLWSKAGHFNKALSKGAKTTTWIWNLHASAHDFDIQQGSAGLIARKVFSSGLAHLSLVFFWLGGMHFHGAYLSNYSAWLKDPKSVAPSSHIAYSLVGQDILNSYTSQYFSGITITSGFFQLYRSEGIVTQSQLKYACAASLIATLICLSGSYLHMQLMSKFTSFYKKFQSLSQSHLIIMFGFGSVSFSAHQIHEALPINSLLDSGIWDPQLFSAILLGTPSAITGKLLNPSTGSIFLSQVAAHHLAVGIVFITLGLIKWCNLFFSRNAILSLRLAYMDYHAQLSINLAVWASLSMVAAHHLTEIPVYPYESTDYPTVLCLFVHHACLSGFFTVASGAHASIFVIRQLPTSEIRHRDPIIGHLIWVCIALGLHSFGLYCHNDTLEALGRPEDTFCDNSIQLKPIFAKQFLGLQPGIEVLDGKIVRMTQELGTADFMVHHIHAFTIHVTLLILLKGVLYARNSRLVSDKLELGFAYPCDGPGRGGTCQISPWDHLFLAVFWMYNCLSVVIFHYFWKMQSDVWGSYVHHSSLTCSHYSQGDFSVNSITINGWLRNLLWSEASQVIQSYALPSICSYGFIFLAAHFVWAFSLMFLFSGRAYWQELIESILWSHHKLKIVPHIQPRALSISQGRAVGLTHYVLGGIGCTWAFIISRMLVLTT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Architecture of symbiotic dinoflagellate photosystem I-light-harvesting supercomplex in Symbiodinium.
pubmed doi rcsb
molecule tags Photosynthesis
molecule keywords PCPI-7
total genus 233
structure length 665
sequence length 687
ec nomenclature
pdb deposition date 2023-05-31
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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