8OSJM

Cryo-em structure of clock-bmal1 bound to a nucleosomal e-box at position shl-6.2 (dna conformation 1)
Total Genus 22
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
63
structure length
63
Chain Sequence
KDKAKRVSRNKSEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKHKETTAQSDA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Cooperation between bHLH transcription factors and histones for DNA access
doi rcsb
molecule tags Gene regulation
source organism Homo sapiens
molecule keywords Histone H3.1
total genus 22
structure length 63
sequence length 63
ec nomenclature ec 2.3.1.48: histone acetyltransferase.
pdb deposition date 2023-04-19
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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