8Q4EA

Structure of legionella pneumophila lcl c-terminal domain
Total Genus 35
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
35
sequence length
131
structure length
131
Chain Sequence
DPANSGIRRQLGDKALGGTVIYVNALGTHGLVVANSDQVNSNTWWDAQDSITNPAHFDNEGKLYSDWRLPTRFELNLIYMMRNELGNFLAGNYWSSIEKSSANSWVFNSKTGEIKDIAKSKTAAVRAVRAF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Cell adhesion
molecule keywords HbP1
publication title The Legionella collagen-like protein employs a unique binding mechanism for the recognition of host glycosaminoglycans.
pubmed doi rcsb
source organism Legionella pneumophila 130b
total genus 35
structure length 131
sequence length 131
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2023-08-06
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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