8W22 | Genus

Total Genus 49

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	49
sequence length	475
structure length	405
Chain Sequence	TVGDPTTDAKLDFTARLTIGTDYRSCSGALVDTQWVLTAASCFADDPNQPDTVAAGKPAQLTRATVGRADSNIANGYVREVVELVPHPERDMVLARLDKAIPDIAPVRLASDAPTAGTPLTAVGFGRTKDEWVPIQRHQGAFTVTSVTAGAVNVTGQGGDAICAGDTGGPLLQDKNGTLHLVGVNNRSMQGGCYGSETTSTDAIAAMSDADFVTQTVNRDLGTGNLSDLVASADFNSDGRTDVAAVLEDGSLHAFYAKLEYGREMVQIIGGDFNSDGNGDILNLYTGTATGILNKSKPMWHKTIKQVTRFKFNGRGLVAQWGDGNLYGYYTKVKMWPDATWTRLTGTADINDLTAVRDDGSLNWYAARKLWPDNTWTPMKRIIGGDIAVGGQSTLLLYGIAMRPA

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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The Resolver thinks Pdb

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reading 405 atoms

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1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

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405 atoms created

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

molecule tags	Toxin
publication title	Streptomyces umbrella toxin particles block hyphal growth of competing species doi rcsb
molecule keywords	Intein C-terminal splicing domain-containing protein
total genus	49
structure length	405
sequence length	475
ec nomenclature
pdb deposition date	2024-02-19

Image from the rcsb pdb (www.rcsb.org)

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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8W22C

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization