8WUXA

Cryo-em structure of h. thermophilus groel-groes bullet complex
Total Genus 167
100200300400500020406080100120140160
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
167
sequence length
527
structure length
527
Chain Sequence
AKKVIYGEDARARLKAGVDKLANAVKVTLGPRGREVIIEKKWGTPVVTKDGVTVAKEIEFKDPYENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIFNEGLRAIASGANPMDIKRGIDKAVETVVNEIKKLSIPVSGRKEIEQVATISANNDATIGKIIADAMEAVGKDGVITVEESKSAETTLETVQGMQFDRGYLSPYFVTNPDKMEAVLEDPFILIYEKKISNVKDLLPVLENVVRAGKPLLIIAEDVEAEALATLVVNHIKGVIRACAVKAPGFGQRRKDYLQDIAILTGGTAITEELGIKLESVTLDMLGRADKVIVDKDNTTIVGGKGSKEAIQARIEQIKRQILETTSDYDREKLQERLAKLSGGVAIIRVGAATEAELKEKKARVEDAVHATKAAVEEGIVPGGGVALVRASEALDNLKVDNADQQLGIDIIKKACRTPIRQIAANSGFEGYVVLEKVLQLGKEKGKNWGFDAGVGDYKDMVEAGIIDPTKVVRVAIQNAASVAGTMLTAEALVAEIP

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Chaperone
source organism Hydrogenobacter thermophilus tk-6
publication title Structural insights into thermophilic chaperonin complexes.
pubmed doi rcsb
molecule keywords Chaperonin GroEL
total genus 167
structure length 527
sequence length 527
chains with identical sequence B, C, D, E, F, G, H, I, J, K, L, M, N
ec nomenclature ec 5.6.1.7: chaperonin ATPase.
pdb deposition date 2023-10-21
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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