The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
85
|
sequence length |
283
|
structure length |
271
|
Chain Sequence |
GHMIKYYNINGQQVPVENATLHVSDLSILRGYGIFDYFLAREGHPLFLDDYLNRFYRSAAELYLEIPFDKAELRRQIYALLQANEVREAGIRLVLTGGYSPDGYTPVNPNLLIMMYDLPASAWEFSAQGIKIITHPFSTGIRMLKTIKERGATDLIYVDQGEWIRESARSNFFLVMPDNTIVTADEKILWGITRRQVIDAAREAGYAVEERRIHITELDQAREAFFTSTIKGVMAIGQIDDRVFGDGTIGKVTQELQDLFVGKVKAYLETC
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| publication title |
Crystal structure of D-amino acid transaminase from Haliscomenobacter hydrossis (apo form) after 15 sec of soaking with phenylhydrazine
rcsb |
| molecule tags |
Transferase
|
| source organism |
Haliscomenobacter hydrossis dsm 1100
|
| molecule keywords |
Aminotransferase class IV
|
| total genus |
85
|
| structure length |
271
|
| sequence length |
283
|
| ec nomenclature | |
| pdb deposition date | 2024-03-21 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the Genus database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
